Overall Survival Prediction of Brain Tumor Patients with Multimodal MRI using Swin Unetr

Gihyeon Kim, Fangxu Xing, Hyoun Joong Kong, Emiliano Santarnecchi, Helen A. Shih, Thomas Bortfeld, Georges El Fakhri, Xiaofeng Liu, Jang Hwan Choi, Jonghye Woo

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

Abstract

Accurate prediction of glioblastoma patient survival can significantly aid in personalized treatment planning. While pre-operative multimodal magnetic resonance imaging (MRI) offers complementary information, current methods are constrained by relatively limited data and largely rely on hand-crafted features extracted from segmentation results. To address these issues, in this work, we propose a data-efficient multi-task framework to take advantage of hierarchical segmentation features within advanced Swin UNETR for survival prediction. By integrating multi-scale features, we are able to capture detailed spatial information and global context, while employing the shifted window mechanism to maintain computational efficiency and scalability for 3D volumes. We further alleviate survival data scarcity through segmentation pre-training, while the features are fine-tuned to align with the survival prediction task and refined by statistical F-values. In addition, age information is incorporated alongside the extracted features to enhance survival prediction performance. Through comprehensive evaluations on the BraTS dataset, we demonstrate that our model achieves superior segmentation accuracy and state-of-the-art survival prediction performance, offering a robust solution for clinical prognosis in glioblastoma patients.

Original languageEnglish
Title of host publicationISBI 2025 - 2025 IEEE 22nd International Symposium on Biomedical Imaging, Proceedings
PublisherIEEE Computer Society
ISBN (Electronic)9798331520526
DOIs
StatePublished - 2025
Event22nd IEEE International Symposium on Biomedical Imaging, ISBI 2025 - Houston, United States
Duration: 14 Apr 202517 Apr 2025

Publication series

NameProceedings - International Symposium on Biomedical Imaging
ISSN (Print)1945-7928
ISSN (Electronic)1945-8452

Conference

Conference22nd IEEE International Symposium on Biomedical Imaging, ISBI 2025
Country/TerritoryUnited States
CityHouston
Period14/04/2517/04/25

Bibliographical note

Publisher Copyright:
© 2025 IEEE.

Keywords

  • Deep Learning
  • Hierarchical Feature
  • Multi-task Learning
  • Multimodal MRI
  • Survival Prediction

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