Draft genome sequence of Halolamina rubra CBA1107T, an agarolytic haloarchaeon isolated from solar salt

Mi Hwa Lee; Hae Won Lee; Eun Ji Song; Hye Seon Song; Kyung June Yim; In Tae Cha; Myung Ji Seo; Jin Kyu Rhee; Hak Jong Choi; Daekyung Kim; Kil Nam Kim; Seong Woon Roh; Young Do Nam

doi:10.1016/j.margen.2014.09.003

Draft genome sequence of Halolamina rubra CBA1107^T, an agarolytic haloarchaeon isolated from solar salt

Mi Hwa Lee, Hae Won Lee, Eun Ji Song, Hye Seon Song, Kyung June Yim, In Tae Cha, Myung Ji Seo, Jin Kyu Rhee, Hak Jong Choi, Daekyung Kim, Kil Nam Kim, Seong Woon Roh, Young Do Nam

Food Science and Biotechnology

Research output: Contribution to journal › Article › peer-review

1 Scopus citations

Abstract

Halolamina rubra CBA1107^T (=CECT 8421^T, JCM 19436^T), an extremely halophilic archaeon, was isolated from non-purified solar salt in the Republic of Korea. H. rubra CBA1107^T shows agarase activity, and its draft genome contains 2955,064bp with a G+C content of 69.0%. This is the first genome that has been sequenced in the genus Halolamina.

Original language	English
Pages (from-to)	127-128
Number of pages	2
Journal	Marine Genomics
Volume	18
Issue number	PB
DOIs	https://doi.org/10.1016/j.margen.2014.09.003
State	Published - 1 Dec 2014

Bibliographical note

Funding Information:
This work was supported by the Basic Science Research Program through the National Research Foundation of Korea ( 2012R1A1A2040922 ), by a project fund ( C34703 ) to J.S. Choi from the Center for Analytical Research of Disaster Science of Korea Basic Science Institute , and by KBSI grant ( T34525 ) to J.-K. Rhee from Korea Basic Science Institute Western Seoul Center.

Publisher Copyright:
© 2014 Elsevier B.V.

Keywords

Agarase activity
Extremely halophilic archaea
Genome sequence
Halolamina rubra

Access to Document

10.1016/j.margen.2014.09.003

Cite this

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title = "Draft genome sequence of Halolamina rubra CBA1107T, an agarolytic haloarchaeon isolated from solar salt",

abstract = "Halolamina rubra CBA1107T (=CECT 8421T, JCM 19436T), an extremely halophilic archaeon, was isolated from non-purified solar salt in the Republic of Korea. H. rubra CBA1107T shows agarase activity, and its draft genome contains 2955,064bp with a G+C content of 69.0%. This is the first genome that has been sequenced in the genus Halolamina.",

keywords = "Agarase activity, Extremely halophilic archaea, Genome sequence, Halolamina rubra",

author = "Lee, {Mi Hwa} and Lee, {Hae Won} and Song, {Eun Ji} and Song, {Hye Seon} and Yim, {Kyung June} and Cha, {In Tae} and Seo, {Myung Ji} and Rhee, {Jin Kyu} and Choi, {Hak Jong} and Daekyung Kim and Kim, {Kil Nam} and Roh, {Seong Woon} and Nam, {Young Do}",

note = "Funding Information: This work was supported by the Basic Science Research Program through the National Research Foundation of Korea ( 2012R1A1A2040922 ), by a project fund ( C34703 ) to J.S. Choi from the Center for Analytical Research of Disaster Science of Korea Basic Science Institute , and by KBSI grant ( T34525 ) to J.-K. Rhee from Korea Basic Science Institute Western Seoul Center. Publisher Copyright: {\textcopyright} 2014 Elsevier B.V.",

year = "2014",

month = dec,

day = "1",

doi = "10.1016/j.margen.2014.09.003",

language = "English",

volume = "18",

pages = "127--128",

journal = "Marine Genomics",

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T1 - Draft genome sequence of Halolamina rubra CBA1107T, an agarolytic haloarchaeon isolated from solar salt

AU - Lee, Mi Hwa

AU - Lee, Hae Won

AU - Song, Eun Ji

AU - Song, Hye Seon

AU - Yim, Kyung June

AU - Cha, In Tae

AU - Seo, Myung Ji

AU - Rhee, Jin Kyu

AU - Choi, Hak Jong

AU - Kim, Daekyung

AU - Kim, Kil Nam

AU - Roh, Seong Woon

AU - Nam, Young Do

N1 - Funding Information: This work was supported by the Basic Science Research Program through the National Research Foundation of Korea ( 2012R1A1A2040922 ), by a project fund ( C34703 ) to J.S. Choi from the Center for Analytical Research of Disaster Science of Korea Basic Science Institute , and by KBSI grant ( T34525 ) to J.-K. Rhee from Korea Basic Science Institute Western Seoul Center. Publisher Copyright: © 2014 Elsevier B.V.

PY - 2014/12/1

Y1 - 2014/12/1

N2 - Halolamina rubra CBA1107T (=CECT 8421T, JCM 19436T), an extremely halophilic archaeon, was isolated from non-purified solar salt in the Republic of Korea. H. rubra CBA1107T shows agarase activity, and its draft genome contains 2955,064bp with a G+C content of 69.0%. This is the first genome that has been sequenced in the genus Halolamina.

AB - Halolamina rubra CBA1107T (=CECT 8421T, JCM 19436T), an extremely halophilic archaeon, was isolated from non-purified solar salt in the Republic of Korea. H. rubra CBA1107T shows agarase activity, and its draft genome contains 2955,064bp with a G+C content of 69.0%. This is the first genome that has been sequenced in the genus Halolamina.

KW - Agarase activity

KW - Extremely halophilic archaea

KW - Genome sequence

KW - Halolamina rubra

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