Complete mitochondrial genome of the northern mauxia shrimp Acetes chinensis (Decapoda, Dendrobranchiata, Sergestoidae)

Sanghee Kim; Jiyeon Kim; Han Gu Choi; Joong Ki Park; Gi Sik Min

doi:10.3109/19401736.2011.643878

Complete mitochondrial genome of the northern mauxia shrimp Acetes chinensis (Decapoda, Dendrobranchiata, Sergestoidae)

Sanghee Kim, Jiyeon Kim, Han Gu Choi, Joong Ki Park, Gi Sik Min

Divison of EcoScience

Research output: Contribution to journal › Article › peer-review

14 Scopus citations

Abstract

Here, we report the first complete mitochondrial genome sequence of northern mauxia shrimp Acetes chinensis (Decapoda, Dendrobranchiata, Sergestoidae). The genome sequence was 15,740 bp in size, and the gene content, gene order and transcriptional polarity were almost identical to the pancrustacean ground pattern, with the one exception that an extra trnS ₁^AGC was adjacent to the original trnS₁ ^AGA. The two tandemly duplicated trnS1 showed a high sequence similarity (82.3%), with almost identical secondary structure lacking a DHU arm. Comparison of codon usage suggests that both of the trnS1 genes were functional.

Original language	English
Pages (from-to)	28-30
Number of pages	3
Journal	Mitochondrial DNA
Volume	23
Issue number	1
DOIs	https://doi.org/10.3109/19401736.2011.643878
State	Published - Feb 2012

Bibliographical note

Funding Information:
This work was supported by the Polar Academic Program (PAP), KOPRI for G.-S. Min, and the Basic Research Program of the KOPRI (PE11030) for S. Kim and H.-G. Choi.

Keywords

Acetes chinensis
gene duplication
Mitochondrial genome
northern mauxia shrimp
trnS

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title = "Complete mitochondrial genome of the northern mauxia shrimp Acetes chinensis (Decapoda, Dendrobranchiata, Sergestoidae)",

abstract = "Here, we report the first complete mitochondrial genome sequence of northern mauxia shrimp Acetes chinensis (Decapoda, Dendrobranchiata, Sergestoidae). The genome sequence was 15,740 bp in size, and the gene content, gene order and transcriptional polarity were almost identical to the pancrustacean ground pattern, with the one exception that an extra trnS 1AGC was adjacent to the original trnS1 AGA. The two tandemly duplicated trnS1 showed a high sequence similarity (82.3%), with almost identical secondary structure lacking a DHU arm. Comparison of codon usage suggests that both of the trnS1 genes were functional.",

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author = "Sanghee Kim and Jiyeon Kim and Choi, {Han Gu} and Park, {Joong Ki} and Min, {Gi Sik}",

note = "Funding Information: This work was supported by the Polar Academic Program (PAP), KOPRI for G.-S. Min, and the Basic Research Program of the KOPRI (PE11030) for S. Kim and H.-G. Choi.",

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AU - Park, Joong Ki

AU - Min, Gi Sik

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Complete mitochondrial genome of the northern mauxia shrimp Acetes chinensis (Decapoda, Dendrobranchiata, Sergestoidae)

Abstract

Bibliographical note

Keywords

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